Pairwise fitting emdb-1836 on emdb-5673 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-5673 by gmfit(PID:4149543).

RANK[1] Corr.Coeff:0.522 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-5673)
display:
color:
Electron cryo-microscopy of enterovirus 71 complexed with a Fab fragment [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.522 0.459 0.450 0.448 0.447 0.444 0.442 0.441 0.439 0.438

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5673.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.262679,-0.943938,0.199951 162.432874 center 0,0,0 model #1
    move 135.116906,-210.641379,200.255158 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5673)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4149543)]