Pairwise fitting emdb-1836 on emdb-3129 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-3129 by gmfit(PID:4131155).

RANK[1] Corr.Coeff:0.519 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-3129)
display:
color:
Structure-based energetics of protein interfaces guide FMDV vaccine design [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.519 0.477 0.476 0.475 0.474 0.474 0.474 0.473 0.471 0.470

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3129.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.380480,-0.923996,0.038288 174.195348 center 0,0,0 model #1
    move 42.596134,-234.908305,185.238239 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3129)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4131155)]