Pairwise fitting emdb-1836 on emdb-2180 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-2180 by gmfit(PID:4121087).

RANK[1] Corr.Coeff:0.574 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-2180)
display:
color:
3D reconstruction of LDL at 37C (human body temperature) using cryo-EM techniques [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.574 0.541 0.504 0.461 0.428 0.427 0.426 0.415 0.415 0.414

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2180.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.616606,-0.023091,0.786933 94.449161 center 0,0,0 model #1
    move -18.102554,-15.437289,-316.152753 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2180)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4121087)]