Pairwise fitting emdb-1836 on emdb-1688 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-1688 by gmfit(PID:912752).





RANK[1] Corr.Coeff:0.687

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

display:



color:



Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-1688)

display:



color:


CryoEM reconstruction of human parechovirus 1 complexed with integrin alphaV-beta3 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.687
0.687
0.686
0.683
0.682
0.681
0.681
0.681
0.681
0.680







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1688.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.893580,-0.279253,0.351471 64.527268 center 0,0,0 model #1
move -47.433032,-287.801499,48.403175 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1688)]

[Download the target GMM(emdb 1836)]

[Download gmfit result file(912752)]