Pairwise fitting emdb-1836 on emdb-1433 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-1433 by gmfit(PID:4087914).

RANK[1] Corr.Coeff:0.653 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-1433)
display:
color:
The three-dimensional structure of genomic RNA in bacteriophage MS2: implications for assembly. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.653 0.652 0.651 0.643 0.643 0.643 0.642 0.642 0.641 0.639

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1433.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.508341,-0.687384,0.518741 138.691134 center 0,0,0 model #1
    move 396.710300,108.070359,449.409204 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1433)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4087914)]