Pairwise fitting emdb-1836 on emdb-1411 by gmfit










Pairwise fitting of target emdb-1836 on reference emdb-1411 by gmfit(PID:370422).





RANK[1] Corr.Coeff:0.353

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1836)

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color:



Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1836)]







REFERENCE(emdb-1411)

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color:


Interaction of decay-accelerating factor with coxsackievirus B3. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.353
0.226
0.225
0.223
0.222
0.220
0.220
0.218
0.217
0.216







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1411.map.gz", and read it.

  2.  Download the Target map "emd_1836.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.113782,0.893851,0.433686 46.517223 center 0,0,0 model #1
move -181.011404,-267.791054,5.758438 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!