Pairwise fitting emdb-1836 on emdb-1058 by gmfit



Pairwise fitting of target emdb-1836 on reference emdb-1058 by gmfit(PID:4115050).

RANK[1] Corr.Coeff:0.750 [JSmol] [Molmil]
TARGET(emdb-1836)
display:
color:
Conformational changes of Adeno-associated Virus type 1 induced by genome packaging [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1836)]
REFERENCE(emdb-1058)
display:
color:
The structure of echovirus type 12 bound to a two-domain fragment of its cellular attachment protein decay-accelerating factor (CD 55). [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.750 0.749 0.745 0.745 0.744 0.744 0.744 0.743 0.742 0.742

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1058.map.gz", and read it.
  2. Download the Target map "emd_1836.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.322145,0.379677,0.867219 123.944010 center 0,0,0 model #1
    move 30.560865,-140.292475,-259.101196 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1058)] [Download the target GMM(emdb 1836)] [Download gmfit result file(4115050)]