Pairwise fitting emdb-1833 on emdb-1208 by gmfit










Pairwise fitting of target emdb-1833 on reference emdb-1208 by gmfit(PID:4128746).





RANK[1] Corr.Coeff:0.547

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1833)

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Drosophila melanogaster CMG complex - APO [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1833)]







REFERENCE(emdb-1208)

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Three-dimensional structure of the human DNA-PKcs/Ku70/Ku80 complex assembled on DNA and its implications for DNA DSB repair. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.547
0.522
0.502
0.493
0.481
0.464
0.436
0.351
0.347
0.341







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1208.map.gz", and read it.

  2.  Download the Target map "emd_1833.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.592336,0.802203,0.074890 162.287947 center 0,0,0 model #1
move -4.265985,8.105827,-7.005152 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1208)]

[Download the target GMM(emdb 1833)]

[Download gmfit result file(4128746)]