Pairwise fitting emdb-1774 on emdb-6570 by gmfit



Pairwise fitting of target emdb-1774 on reference emdb-6570 by gmfit(PID:4088163).

RANK[1] Corr.Coeff:0.573 [JSmol] [Molmil]
TARGET(emdb-1774)
display:
color:
Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1774)]
REFERENCE(emdb-6570)
display:
color:
The cryo-EM structure of yeast spliceosomal U4/U6.U5 tri-snRNP (improved map for U5 Snu114 region at 3.77 A) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.573 0.525 0.495 0.456 0.446 0.403 0.358 0.340 0.329 0.328

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6570.map.gz", and read it.
  2. Download the Target map "emd_1774.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.371202,0.809627,0.454658 158.081228 center 0,0,0 model #1
    move 435.217286,101.928969,346.883010 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 6570)] [Download the target GMM(emdb 1774)] [Download gmfit result file(4088163)]