Pairwise fitting emdb-1774 on emdb-6570 by gmfit










Pairwise fitting of target emdb-1774 on reference emdb-6570 by gmfit(PID:4115675).





RANK[1] Corr.Coeff:0.573

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

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Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(emdb-6570)

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The cryo-EM structure of yeast spliceosomal U4/U6.U5 tri-snRNP (improved map for U5 Snu114 region at 3.77 A) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.573
0.525
0.495
0.456
0.446
0.403
0.358
0.340
0.329
0.328







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6570.map.gz", and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.371202,0.809627,0.454658 158.081228 center 0,0,0 model #1
move 435.217286,101.928969,346.883010 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6570)]

[Download the target GMM(emdb 1774)]

[Download gmfit result file(4115675)]