Pairwise fitting emdb-1774 on emdb-3048 by gmfit










Pairwise fitting of target emdb-1774 on reference emdb-3048 by gmfit(PID:4131872).





RANK[1] Corr.Coeff:0.769

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1774)

display:



color:



Understanding Ribosome Assembly: The Structure of in vivo Assembled Immature 30S Subunits Revealed by Cryo-Electron Microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1774)]







REFERENCE(emdb-3048)

display:



color:


Structure of a partial yeast 48S preinitiation complex in closed conformation [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.769
0.623
0.530
0.526
0.515
0.505
0.466
0.402
0.386
0.386







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3048.map.gz", and read it.

  2.  Download the Target map "emd_1774.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.270133,-0.534962,0.800528 166.068794 center 0,0,0 model #1
move 364.149098,426.893421,187.980164 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3048)]

[Download the target GMM(emdb 1774)]

[Download gmfit result file(4131872)]