Pairwise fitting emdb-1770 on emdb-6563 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-6563 by gmfit(PID:142822).





RANK[1] Corr.Coeff:0.688

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

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30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-6563)

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The cryo-EM structure of yeast spliceosomal U4/U6.U5 tri-snRNP (improved map for U4/U6 RNA region at 3.57 A) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.688
0.643
0.610
0.600
0.582
0.579
0.566
0.539
0.525
0.504







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6563.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.729953,-0.347788,-0.588398 87.487262 center 0,0,0 model #1
move 229.416774,219.217768,248.352773 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!