Pairwise fitting emdb-1770 on emdb-5906 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-5906 by gmfit(PID:4189828).





RANK[1] Corr.Coeff:0.846

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

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color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-5906)

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color:


Cryo-EM structure of low salt treated immature 30S ribosomal subunit from rsga and rbfa deleted E.coli strain [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.846
0.690
0.605
0.589
0.583
0.578
0.567
0.565
0.529
0.431







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5906.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.750014,-0.600679,-0.276880 162.049847 center 0,0,0 model #1
move 1.926824,4.781976,4.810961 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5906)]

[Download the target GMM(emdb 1770)]

[Download gmfit result file(4189828)]