Pairwise fitting emdb-1770 on emdb-5808 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-5808 by gmfit(PID:253189).





RANK[1] Corr.Coeff:0.589

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-5808)

display:



color:


Negative-stain electron microscopy reconstruction of Tetrahymena telomerase (Teb1-f, conformation III) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.589
0.536
0.500
0.491
0.480
0.466
0.428
0.424
0.394
0.392







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5808.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.027915,0.720528,0.692864 108.893707 center 0,0,0 model #1
move 1.942042,4.377391,5.044703 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5808)]

[Download the target GMM(emdb 1770)]

[Download gmfit result file(253189)]