Pairwise fitting emdb-1770 on emdb-5502 by gmfit



Pairwise fitting of target emdb-1770 on reference emdb-5502 by gmfit(PID:4124813).

RANK[1] Corr.Coeff:0.389 [JSmol] [Molmil]
TARGET(emdb-1770)
display:
color:
30S-002mRNA (after classification) [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1770)]
REFERENCE(emdb-5502)
display:
color:
Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.389 0.376 0.360 0.350 0.345 0.338 0.336 0.330 0.326 0.308

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_5502.map.gz", and read it.
  2. Download the Target map "emd_1770.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.733412,-0.575840,-0.361270 171.193680 center 0,0,0 model #1
    move -21.086301,-25.093206,3.548743 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 5502)] [Download the target GMM(emdb 1770)] [Download gmfit result file(4124813)]