Pairwise fitting emdb-1770 on emdb-5502 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-5502 by gmfit(PID:4124813).





RANK[1] Corr.Coeff:0.389

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-5502)

display:



color:


Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.389
0.376
0.360
0.350
0.345
0.338
0.336
0.330
0.326
0.308







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5502.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.733412,-0.575840,-0.361270 171.193680 center 0,0,0 model #1
move -21.086301,-25.093206,3.548743 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5502)]

[Download the target GMM(emdb 1770)]

[Download gmfit result file(4124813)]