Pairwise fitting emdb-1770 on emdb-2604 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-2604 by gmfit(PID:511804).





RANK[1] Corr.Coeff:0.839

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-2604)

display:



color:


Kluyveromyces lactis 80S ribosome in complex with CrPV-IRES in a rotated stated with masked 40S [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.839
0.750
0.668
0.666
0.663
0.642
0.638
0.631
0.545
0.522







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2604.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.730198,0.676112,0.098407 163.127105 center 0,0,0 model #1
move 170.994621,255.479944,219.564347 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!