Pairwise fitting emdb-1770 on emdb-2453 by gmfit










Pairwise fitting of target emdb-1770 on reference emdb-2453 by gmfit(PID:4129175).





RANK[1] Corr.Coeff:0.820

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1770)

display:



color:



30S-002mRNA (after classification) [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1770)]







REFERENCE(emdb-2453)

display:



color:


30S Ribosome Subunit Assembly Intermediates, Intermediate Group 4a [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.820
0.716
0.683
0.626
0.600
0.595
0.584
0.567
0.561
0.531







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2453.map.gz", and read it.

  2.  Download the Target map "emd_1770.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.257679,-0.831753,0.491721 148.860801 center 0,0,0 model #1
move 3.334980,1.324835,1.224643 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2453)]

[Download the target GMM(emdb 1770)]

[Download gmfit result file(4129175)]