Pairwise fitting emdb-1737 on pdb-5j0n by gmfit










Pairwise fitting of target emdb-1737 on reference pdb-5j0n by gmfit(PID:4158920).





RANK[1] Corr.Coeff:0.428

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

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Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(pdb-5j0n)

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color:


b'LAMBDA EXCISION HJ INTERMEDIATE                                       ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.428
0.423
0.412
0.399
0.399
0.361
0.344
0.334
0.328
0.319







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5j0n"(PDB-format) or 
 "5j0n"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.802850,0.012866,0.596043 166.696670 center 0,0,0 model #1
move 324.180104,282.928778,388.147747 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 5j0n)]

[Download the target GMM(emdb 1737)]

[Download gmfit result file(4158920)]