Pairwise fitting emdb-1737 on pdb-4aau by gmfit










Pairwise fitting of target emdb-1737 on reference pdb-4aau by gmfit(PID:42158).





RANK[1] Corr.Coeff:0.562

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

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Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(pdb-4aau)

display:



color:


b'ATP-TRIGGERED MOLECULAR MECHANICS OF THE CHAPERONIN GROEL             ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.562
0.532
0.532
0.530
0.529
0.529
0.524
0.519
0.466
0.456







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4aau"(PDB-format) or 
 "4aau"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.866874,-0.495920,-0.050922 153.489233 center 0,0,0 model #1
move -206.412279,-133.471866,151.839237 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4aau)]

[Download the target GMM(emdb 1737)]

[Download gmfit result file(42158)]