Pairwise fitting emdb-1737 on emdb-8131 by gmfit










Pairwise fitting of target emdb-1737 on reference emdb-8131 by gmfit(PID:4149889).





RANK[1] Corr.Coeff:0.501

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

display:



color:



Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(emdb-8131)

display:



color:


Human core TFIIH bound to DNA within the PIC [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.501
0.501
0.492
0.484
0.478
0.478
0.462
0.462
0.415
0.306







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8131.map.gz", and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.158023,0.870514,0.466084 55.933655 center 0,0,0 model #1
move 152.934067,-33.019361,307.198711 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8131)]

[Download the target GMM(emdb 1737)]

[Download gmfit result file(4149889)]