Pairwise fitting emdb-1737 on emdb-1208 by gmfit










Pairwise fitting of target emdb-1737 on reference emdb-1208 by gmfit(PID:18943).





RANK[1] Corr.Coeff:0.611

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1737)

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Pyruvate carboxylase from S. aureus after addition of acetyl-CoA, AMP-PNP, KHCO3 and pyruvate [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1737)]







REFERENCE(emdb-1208)

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Three-dimensional structure of the human DNA-PKcs/Ku70/Ku80 complex assembled on DNA and its implications for DNA DSB repair. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.611
0.578
0.563
0.554
0.550
0.542
0.519
0.513
0.513
0.506







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1208.map.gz", and read it.

  2.  Download the Target map "emd_1737.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.903584,-0.297086,0.308669 135.657133 center 0,0,0 model #1
move -43.002945,263.061590,-101.311393 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1208)]

[Download the target GMM(emdb 1737)]

[Download gmfit result file(18943)]