Pairwise fitting emdb-1718 on emdb-5030 by gmfit










Pairwise fitting of target emdb-1718 on reference emdb-5030 by gmfit(PID:549007).





RANK[1] Corr.Coeff:0.889

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1718)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1718)]







REFERENCE(emdb-5030)

display:



color:


GTPase activation of elongation factor EF-Tu by the ribosome during decoding: a cryo-EM structure of the  Thermus thermophilus ribosome in which the ternary complex of EF-Tu, tRNA and guanine nucleotide has been trapped on the ribosome with the antibiotic kirromycin. [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.889
0.724
0.675
0.672
0.665
0.656
0.642
0.631
0.629
0.614







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5030.map.gz", and read it.

  2.  Download the Target map "emd_1718.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.785151,0.200246,-0.586038 138.522381 center 0,0,0 model #1
move -52.609306,273.705893,140.427824 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!