Pairwise fitting emdb-1718 on emdb-1541 by gmfit










Pairwise fitting of target emdb-1718 on reference emdb-1541 by gmfit(PID:4100822).





RANK[1] Corr.Coeff:0.892

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1718)

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color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1718)]







REFERENCE(emdb-1541)

display:



color:


Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.892
0.726
0.696
0.696
0.692
0.689
0.662
0.654
0.646
0.638







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1541.map.gz", and read it.

  2.  Download the Target map "emd_1718.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.158509,-0.851985,0.498996 98.932514 center 0,0,0 model #1
move 465.541842,125.494365,55.514528 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1541)]

[Download the target GMM(emdb 1718)]

[Download gmfit result file(4100822)]