Pairwise fitting emdb-1718 on emdb-1541 by gmfit



Pairwise fitting of target emdb-1718 on reference emdb-1541 by gmfit(PID:4127989).

RANK[1] Corr.Coeff:0.892 [JSmol] [Molmil]
TARGET(emdb-1718)
display:
color:
Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1718)]
REFERENCE(emdb-1541)
display:
color:
Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.892 0.726 0.696 0.696 0.692 0.689 0.662 0.654 0.646 0.638

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1541.map.gz", and read it.
  2. Download the Target map "emd_1718.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.158509,-0.851985,0.498996 98.932514 center 0,0,0 model #1
    move 465.541842,125.494365,55.514528 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1541)] [Download the target GMM(emdb 1718)] [Download gmfit result file(4127989)]