Pairwise fitting emdb-1718 on emdb-1173 by gmfit



Pairwise fitting of target emdb-1718 on reference emdb-1173 by gmfit(PID:4104361).

RANK[1] Corr.Coeff:0.459 [JSmol] [Molmil]
TARGET(emdb-1718)
display:
color:
Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1718)]
REFERENCE(emdb-1173)
display:
color:
Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.459 0.421 0.408 0.408 0.405 0.401 0.397 0.392 0.391 0.391

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1173.map.gz", and read it.
  2. Download the Target map "emd_1718.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.995158,0.067245,-0.071683 142.167292 center 0,0,0 model #1
    move -195.074393,63.276798,250.224260 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1173)] [Download the target GMM(emdb 1718)] [Download gmfit result file(4104361)]