Pairwise fitting emdb-1717 on emdb-5785 by gmfit










Pairwise fitting of target emdb-1717 on reference emdb-5785 by gmfit(PID:34364).





RANK[1] Corr.Coeff:0.883

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(emdb-5785)

display:



color:


EttA-bound E. coli 70S ribosome complex containing P-site tRNA [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.883
0.674
0.657
0.656
0.645
0.641
0.630
0.618
0.597
0.589







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5785.map.gz", and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.774458,0.201815,-0.599571 136.271011 center 0,0,0 model #1
move -51.722297,281.265457,126.930759 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5785)]

[Download the target GMM(emdb 1717)]

[Download gmfit result file(34364)]