Pairwise fitting emdb-1717 on emdb-4122 by gmfit










Pairwise fitting of target emdb-1717 on reference emdb-4122 by gmfit(PID:446136).





RANK[1] Corr.Coeff:0.894

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(emdb-4122)

display:



color:


Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.894
0.701
0.678
0.676
0.674
0.662
0.660
0.651
0.645
0.644







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_4122.map.gz", and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.676456,0.624974,-0.389634 6.226451 center 0,0,0 model #1
move -40.646284,0.110511,-30.056828 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!