Pairwise fitting emdb-1717 on emdb-1854 by gmfit










Pairwise fitting of target emdb-1717 on reference emdb-1854 by gmfit(PID:4157445).





RANK[1] Corr.Coeff:0.876

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(emdb-1854)

display:



color:


An insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.876
0.708
0.691
0.673
0.669
0.657
0.656
0.647
0.623
0.621







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1854.map.gz", and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.113272,-0.838011,0.533767 100.239633 center 0,0,0 model #1
move 286.426417,-69.684691,-114.806676 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1854)]

[Download the target GMM(emdb 1717)]

[Download gmfit result file(4157445)]