Pairwise fitting emdb-1717 on emdb-1854 by gmfit



Pairwise fitting of target emdb-1717 on reference emdb-1854 by gmfit(PID:4092600).

RANK[1] Corr.Coeff:0.876 [JSmol] [Molmil]
TARGET(emdb-1717)
display:
color:
Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1717)]
REFERENCE(emdb-1854)
display:
color:
An insertion domain within mammalian mitochondrial translation initiation factor 2 serves the role of eubacterial initiation factor 1 [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.876 0.708 0.691 0.673 0.669 0.657 0.656 0.647 0.623 0.621

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1854.map.gz", and read it.
  2. Download the Target map "emd_1717.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.113272,-0.838011,0.533767 100.239633 center 0,0,0 model #1
    move 286.426417,-69.684691,-114.806676 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1854)] [Download the target GMM(emdb 1717)] [Download gmfit result file(4092600)]