Pairwise fitting emdb-1717 on emdb-1798 by gmfit










Pairwise fitting of target emdb-1717 on reference emdb-1798 by gmfit(PID:21808).





RANK[1] Corr.Coeff:0.748

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

display:



color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(emdb-1798)

display:



color:


tRNA translocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.748
0.728
0.685
0.658
0.653
0.648
0.641
0.632
0.625
0.612







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1798.map.gz", and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.253069,0.920870,0.296573 127.086856 center 0,0,0 model #1
move 87.472559,-227.431794,197.077055 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1798)]

[Download the target GMM(emdb 1717)]

[Download gmfit result file(21808)]