Pairwise fitting emdb-1717 on emdb-1172 by gmfit










Pairwise fitting of target emdb-1717 on reference emdb-1172 by gmfit(PID:190374).





RANK[1] Corr.Coeff:0.522

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1717)

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color:



Ribosome dynamics and tRNA movement as visualized by time-resolved electron cryomicroscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1717)]







REFERENCE(emdb-1172)

display:



color:


Conformational transition of initiation factor 2 from the GTP- to GDP-bound state visualized on the ribosome. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.522
0.471
0.465
0.457
0.456
0.447
0.444
0.443
0.439
0.432







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1172.map.gz", and read it.

  2.  Download the Target map "emd_1717.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.983534,0.004535,-0.180665 146.482635 center 0,0,0 model #1
move -251.825913,67.470713,184.987278 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!