Pairwise fitting emdb-1711 on pdb-5fwl by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-5fwl by gmfit(PID:259992).





RANK[1] Corr.Coeff:0.656

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-5fwl)

display:



color:


b'ATOMIC CRYOEM STRUCTURE OF HSP90-CDC37-CDK4 COMPLEX                   ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.656
0.616
0.594
0.588
0.574
0.568
0.567
0.566
0.553
0.552







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "5fwl"(PDB-format) or 
 "5fwl"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.048076,0.908010,0.416180 157.528084 center 0,0,0 model #1
move 168.745805,168.032614,170.295289 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!