Pairwise fitting emdb-1711 on pdb-4au6 by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-4au6 by gmfit(PID:522725).





RANK[1] Corr.Coeff:0.702

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-4au6)

display:



color:


b'LOCATION OF THE DSRNA-DEPENDENT POLYMERASE, VP1, IN ROTAVIRUS         ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.702
0.687
0.683
0.681
0.681
0.681
0.673
0.673
0.667
0.652







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4au6"(PDB-format) or 
 "4au6"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.521650,-0.844021,-0.124537 143.302767 center 0,0,0 model #1
move 100.629716,2.145833,-172.131235 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!