Pairwise fitting emdb-1711 on pdb-3izz by gmfit










Pairwise fitting of target emdb-1711 on reference pdb-3izz by gmfit(PID:568998).





RANK[1] Corr.Coeff:0.461

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(pdb-3izz)

display:



color:


b'MODELS FOR RIBOSOME COMPONENTS THAT ARE NEAREST NEIGHBORS TO THE      ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.461
0.436
0.430
0.398
0.396
0.390
0.384
0.381
0.379
0.364







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3izz"(PDB-format) or 
 "3izz"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.397129,-0.746057,-0.534498 117.911812 center 0,0,0 model #1
move -19.685198,38.371147,-26.705204 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!