Pairwise fitting emdb-1711 on emdb-6058 by gmfit



Pairwise fitting of target emdb-1711 on reference emdb-6058 by gmfit(PID:4059005).

RANK[1] Corr.Coeff:0.577 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(emdb-6058)
display:
color:
Negative stain EM structure of the yeast dynein motor domain in the presence of ATP [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.577 0.542 0.537 0.521 0.508 0.506 0.501 0.487 0.485 0.470

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_6058.map.gz", and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.405872,0.781595,-0.473685 176.967297 center 0,0,0 model #1
    move 137.621962,133.872503,129.363069 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 6058)] [Download the target GMM(emdb 1711)] [Download gmfit result file(4059005)]