Pairwise fitting emdb-1711 on emdb-6048 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-6048 by gmfit(PID:4126981).





RANK[1] Corr.Coeff:0.581

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-6048)

display:



color:


Cryo-EM structure of the dynein motor domain in the presence of ADP-AlF3 [Ngauss:20]



[Download the reference map]





Other Transformations
rank
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Corr.Coeff.
0.581
0.568
0.563
0.557
0.551
0.540
0.536
0.521
0.521
0.505







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_6048.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.566852,0.665311,-0.485840 84.497424 center 0,0,0 model #1
move 122.921245,114.269279,112.294332 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 6048)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(4126981)]