Pairwise fitting emdb-1711 on emdb-5320 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-5320 by gmfit(PID:4087406).





RANK[1] Corr.Coeff:0.658

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

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color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-5320)

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Molecular structure of soluble trimeric HIV-1 glycoprotein gp140 KNH1144 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.658
0.638
0.591
0.589
0.578
0.557
0.547
0.546
0.536
0.533







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5320.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.463974,0.820447,-0.334059 90.186040 center 0,0,0 model #1
move 212.437444,206.508474,194.012081 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5320)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(4087406)]