Pairwise fitting emdb-1711 on emdb-3218 by gmfit



Pairwise fitting of target emdb-1711 on reference emdb-3218 by gmfit(PID:4088574).

RANK[1] Corr.Coeff:0.702 [JSmol] [Molmil]
TARGET(emdb-1711)
display:
color:
Pyrococcus furiosus RNA Polymerase [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1711)]
REFERENCE(emdb-3218)
display:
color:
Structure of transcribing mammalian RNA polymerase II (EC1) [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.702 0.662 0.642 0.638 0.637 0.636 0.616 0.609 0.609 0.602

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_3218.map.gz", and read it.
  2. Download the Target map "emd_1711.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.824574,0.484296,-0.292464 70.060817 center 0,0,0 model #1
    move 137.667164,142.234331,130.819116 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 3218)] [Download the target GMM(emdb 1711)] [Download gmfit result file(4088574)]