Pairwise fitting emdb-1711 on emdb-3218 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-3218 by gmfit(PID:4133110).





RANK[1] Corr.Coeff:0.702

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

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color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-3218)

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color:


Structure of transcribing mammalian RNA polymerase II (EC1) [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.702
0.662
0.642
0.638
0.637
0.636
0.616
0.609
0.609
0.602







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3218.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.824574,0.484296,-0.292464 70.060817 center 0,0,0 model #1
move 137.667164,142.234331,130.819116 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 3218)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(4133110)]