Pairwise fitting emdb-1711 on emdb-2039 by gmfit










Pairwise fitting of target emdb-1711 on reference emdb-2039 by gmfit(PID:11344).





RANK[1] Corr.Coeff:0.597

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1711)

display:



color:



Pyrococcus furiosus RNA Polymerase [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1711)]







REFERENCE(emdb-2039)

display:



color:


negative stain Electron Microscopy of the N-Ethylmaleimide Sensitive Factor (NSF) [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.597
0.554
0.553
0.550
0.536
0.535
0.523
0.509
0.509
0.506







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2039.map.gz", and read it.

  2.  Download the Target map "emd_1711.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.225511,0.345459,-0.910935 98.347182 center 0,0,0 model #1
move 109.538283,109.808970,107.673479 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2039)]

[Download the target GMM(emdb 1711)]

[Download gmfit result file(11344)]