Pairwise fitting emdb-1618 on emdb-8296 by gmfit










Pairwise fitting of target emdb-1618 on reference emdb-8296 by gmfit(PID:377068).





RANK[1] Corr.Coeff:0.595

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(emdb-8296)

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Structure of 1x duplex DNA target-bound Cascade/I-C [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.595
0.517
0.513
0.490
0.469
0.460
0.433
0.401
0.270
0.257







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_8296.map.gz", and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.421648,-0.463483,0.779356 77.484660 center 0,0,0 model #1
move 249.684856,125.337762,-22.274196 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 8296)]

[Download the target GMM(emdb 1618)]

[Download gmfit result file(377068)]