Pairwise fitting emdb-1618 on emdb-5556 by gmfit










Pairwise fitting of target emdb-1618 on reference emdb-5556 by gmfit(PID:565759).





RANK[1] Corr.Coeff:0.593

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

display:



color:



3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(emdb-5556)

display:



color:


Negative stain electron microscopy structure of Nup192 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.593
0.494
0.472
0.404
0.402
0.396
0.394
0.346
0.194
0.113







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5556.map.gz", and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.422889,0.717854,-0.553038 98.503018 center 0,0,0 model #1
move -54.014591,193.382286,212.378699 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!