Pairwise fitting emdb-1618 on emdb-2663 by gmfit










Pairwise fitting of target emdb-1618 on reference emdb-2663 by gmfit(PID:4111162).





RANK[1] Corr.Coeff:0.573

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1618)

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3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1618)]







REFERENCE(emdb-2663)

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Structure of SMG1C complex, comprising SMG1 kinase, SMG8 and SMG9 [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.573
0.545
0.519
0.492
0.475
0.425
0.323
0.317
0.162
0.149







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2663.map.gz", and read it.

  2.  Download the Target map "emd_1618.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.777960,-0.627930,0.021962 178.771119 center 0,0,0 model #1
move 80.241389,111.830602,327.100202 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2663)]

[Download the target GMM(emdb 1618)]

[Download gmfit result file(4111162)]