Pairwise fitting emdb-1618 on emdb-2663 by gmfit



Pairwise fitting of target emdb-1618 on reference emdb-2663 by gmfit(PID:4111162).

RANK[1] Corr.Coeff:0.573 [JSmol] [Molmil]
TARGET(emdb-1618)
display:
color:
3D reconstruction of heterodimeric yeast Pol alpha using electron microscopy [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1618)]
REFERENCE(emdb-2663)
display:
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Structure of SMG1C complex, comprising SMG1 kinase, SMG8 and SMG9 [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.573 0.545 0.519 0.492 0.475 0.425 0.323 0.317 0.162 0.149

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2663.map.gz", and read it.
  2. Download the Target map "emd_1618.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.777960,-0.627930,0.021962 178.771119 center 0,0,0 model #1
    move 80.241389,111.830602,327.100202 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2663)] [Download the target GMM(emdb 1618)] [Download gmfit result file(4111162)]