Pairwise fitting emdb-1565 on pdb-4v61 by gmfit



Pairwise fitting of target emdb-1565 on reference pdb-4v61 by gmfit(PID:4061640).

RANK[1] Corr.Coeff:0.940 [JSmol] [Molmil]
TARGET(emdb-1565)
display:
color:
Recognition of Phe-tRNAPhe, Trp-tRNATrp and : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1565)]
REFERENCE(pdb-4v61)
display:
color:
[Ngauss:20]
[Download the reference pdb]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.940 0.754 0.750 0.735 0.721 0.718 0.710 0.708 0.698 0.695

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference molecule "4v61"(PDB-format) or "4v61"(mmCIF-format), and read it.
  2. Download the Target map "emd_1565.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.693998,-0.214727,-0.687211 0.609065 center 0,0,0 model #1
    move -7.354197,2.112828,4.275424 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(pdb 4v61)] [Download the target GMM(emdb 1565)] [Download gmfit result file(4061640)]