Pairwise fitting emdb-1565 on pdb-3j9z by gmfit










Pairwise fitting of target emdb-1565 on reference pdb-3j9z by gmfit(PID:486624).





RANK[1] Corr.Coeff:0.939

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1565)

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Recognition of Phe-tRNAPhe, Trp-tRNATrp and  : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1565)]







REFERENCE(pdb-3j9z)

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color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.939
0.875
0.787
0.772
0.767
0.762
0.753
0.748
0.746
0.727







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j9z"(PDB-format) or 
 "3j9z"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1565.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.228505,0.959299,0.165921 4.836059 center 0,0,0 model #1
move 183.714639,190.285049,187.748974 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!