Pairwise fitting emdb-1565 on emdb-2446 by gmfit



Pairwise fitting of target emdb-1565 on reference emdb-2446 by gmfit(PID:4129602).

RANK[1] Corr.Coeff:0.946 [JSmol] [Molmil]
TARGET(emdb-1565)
display:
color:
Recognition of Phe-tRNAPhe, Trp-tRNATrp and : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1565)]
REFERENCE(emdb-2446)
display:
color:
Visualization of a polytopic membrane protein egressing from the SecY complex - Electron cryo-microscopy of an tightly coupled RNC-SecY complex [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.946 0.936 0.906 0.750 0.732 0.714 0.710 0.678 0.665 0.660

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_2446.map.gz", and read it.
  2. Download the Target map "emd_1565.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn 0.986947,-0.150736,0.056687 4.013571 center 0,0,0 model #1
    move -1.227565,1.371542,0.554252 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 2446)] [Download the target GMM(emdb 1565)] [Download gmfit result file(4129602)]