Pairwise fitting emdb-1565 on emdb-2446 by gmfit










Pairwise fitting of target emdb-1565 on reference emdb-2446 by gmfit(PID:4129602).





RANK[1] Corr.Coeff:0.946

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1565)

display:



color:



Recognition of Phe-tRNAPhe, Trp-tRNATrp and  : a common molecular mechanism for aminoacyl-tRNA selection revealed by cryo-EM [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1565)]







REFERENCE(emdb-2446)

display:



color:


Visualization of a polytopic membrane protein egressing from the SecY complex - Electron cryo-microscopy of an tightly coupled RNC-SecY complex [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.946
0.936
0.906
0.750
0.732
0.714
0.710
0.678
0.665
0.660







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2446.map.gz", and read it.

  2.  Download the Target map "emd_1565.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.986947,-0.150736,0.056687 4.013571 center 0,0,0 model #1
move -1.227565,1.371542,0.554252 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2446)]

[Download the target GMM(emdb 1565)]

[Download gmfit result file(4129602)]