Pairwise fitting emdb-1559 on pdb-4v4u by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-4v4u by gmfit(PID:4096823).





RANK[1] Corr.Coeff:0.307

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

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color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-4v4u)

display:



color:


 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.307
0.303
0.278
0.276
0.273
0.268
0.265
0.265
0.262
0.262







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4v4u"(PDB-format) or 
 "4v4u"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.899919,0.383735,0.207108 174.385692 center 0,0,0 model #1
move -1015.163267,-143.412706,525.190695 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 4v4u)]

[Download the target GMM(emdb 1559)]

[Download gmfit result file(4096823)]