Pairwise fitting emdb-1559 on pdb-4ck5 by gmfit










Pairwise fitting of target emdb-1559 on reference pdb-4ck5 by gmfit(PID:269716).





RANK[1] Corr.Coeff:0.492

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1559)

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color:



3D structure of human endoglin [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1559)]







REFERENCE(pdb-4ck5)

display:



color:


b'PSEUDO-ATOMIC MODEL OF MICROTUBULE-BOUND HUMAN KINESIN-5 MOTOR DOMAIN ' [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.492
0.468
0.457
0.452
0.447
0.436
0.436
0.432
0.417
0.414







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "4ck5"(PDB-format) or 
 "4ck5"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1559.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.598066,-0.573707,0.559622 112.993954 center 0,0,0 model #1
move 804.101570,-431.190721,756.538744 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!