Pairwise fitting emdb-1446 on emdb-5718 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-5718 by gmfit(PID:450531).





RANK[1] Corr.Coeff:0.245

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-5718)

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The structure of Sinorhizobium meliloti phage phiM12, a novel T=19 icosahedral phage that is the founder of a new group of T4-like phages [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.245
0.244
0.239
0.238
0.237
0.236
0.235
0.233
0.232
0.229







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5718.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.911145,0.092921,-0.401474 157.927942 center 0,0,0 model #1
move 610.316591,617.105192,602.536636 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!