Pairwise fitting emdb-1446 on emdb-5655 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-5655 by gmfit(PID:4190670).





RANK[1] Corr.Coeff:0.722

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-5655)

display:



color:


Pseudorabies virus virion capsid from cryo-electron microscopy [Ngauss:20]



[Download the reference map]





Other Transformations
rank
1
2
3
4
5
6
7
8
9
10




Corr.Coeff.
0.722
0.718
0.717
0.717
0.710
0.706
0.705
0.704
0.704
0.702







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_5655.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.712939,0.366826,0.597626 139.533716 center 0,0,0 model #1
move 760.841115,770.948647,757.466881 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 5655)]

[Download the target GMM(emdb 1446)]

[Download gmfit result file(4190670)]