Pairwise fitting emdb-1446 on emdb-3288 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-3288 by gmfit(PID:1127477).





RANK[1] Corr.Coeff:0.722

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

display:



color:



Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-3288)

display:



color:


HSV bubblegram imaging [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.722
0.720
0.686
0.672
0.666
0.665
0.661
0.660
0.654
0.652







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_3288.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.209613,-0.732101,0.648143 137.835701 center 0,0,0 model #1
move -5.716148,-7.499403,4.463624 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!