Pairwise fitting emdb-1446 on emdb-2550 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-2550 by gmfit(PID:4155558).





RANK[1] Corr.Coeff:0.443

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-2550)

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Four levels of hierarchical organization including non-covalent chainmail brace the mature tumor herpesvirus capsid against pressurization [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.443
0.433
0.428
0.427
0.409
0.406
0.406
0.403
0.328
0.326







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_2550.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn 0.968597,0.245789,0.037530 172.918130 center 0,0,0 model #1
move 811.063294,821.998461,1063.177258 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 2550)]

[Download the target GMM(emdb 1446)]

[Download gmfit result file(4155558)]