Pairwise fitting emdb-1446 on emdb-1097 by gmfit










Pairwise fitting of target emdb-1446 on reference emdb-1097 by gmfit(PID:4122479).





RANK[1] Corr.Coeff:0.602

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1446)

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Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1446)]







REFERENCE(emdb-1097)

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Nuclear pore complex structure and dynamics revealed by cryoelectron tomography. [Ngauss:20]



[Download the reference map]





Other Transformations
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Corr.Coeff.
0.602
0.599
0.598
0.593
0.584
0.583
0.576
0.567
0.456
0.447







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference map "emd_1097.map.gz", and read it.

  2.  Download the Target map "emd_1446.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.490515,-0.871389,-0.008742 177.771208 center 0,0,0 model #1
move 1041.877973,1027.467494,1009.692821 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(emdb 1097)]

[Download the target GMM(emdb 1446)]

[Download gmfit result file(4122479)]