Pairwise fitting emdb-1446 on emdb-1097 by gmfit



Pairwise fitting of target emdb-1446 on reference emdb-1097 by gmfit(PID:4057999).

RANK[1] Corr.Coeff:0.602 [JSmol] [Molmil]
TARGET(emdb-1446)
display:
color:
Cryo-electron tomography of Kaposi's sarcoma-associated herpesvirus capsids reveals dynamic scaffolding structures essential to capsid assembly and maturation. [Ngauss:20]
[Download superimposed target map (CCP4) (emdb-1446)]
REFERENCE(emdb-1097)
display:
color:
Nuclear pore complex structure and dynamics revealed by cryoelectron tomography. [Ngauss:20]
[Download the reference map]
Other Transformations rank 1 2 3 4 5 6 7 8 9 10
Corr.Coeff. 0.602 0.599 0.598 0.593 0.584 0.583 0.576 0.567 0.456 0.447

Procedures to view this superposition in your local computer by "UCSF Chimera".

  1. Download the Reference map "emd_1097.map.gz", and read it.
  2. Download the Target map "emd_1446.map.gz", and read it.
  3. Copy following two command lines into a file 'transf.com'.
    turn -0.490515,-0.871389,-0.008742 177.771208 center 0,0,0 model #1
    move 1041.877973,1027.467494,1009.692821 model #1
    
  4. Open 'transf.com' to execute it.

    * Don't move the map/molecule by your mouse until the step 4 have been finished !!

[Download the reference GMM(emdb 1097)] [Download the target GMM(emdb 1446)] [Download gmfit result file(4057999)]