Pairwise fitting emdb-1430 on pdb-3j79 by gmfit










Pairwise fitting of target emdb-1430 on reference pdb-3j79 by gmfit(PID:4131411).





RANK[1] Corr.Coeff:0.829

[JSmol]
[Molmil]






  

      
        
      
    








TARGET(emdb-1430)

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Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits. [Ngauss:20]

[Download superimposed target map (CCP4) (emdb-1430)]







REFERENCE(pdb-3j79)

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 [Ngauss:20]



[Download the reference pdb]





Other Transformations
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Corr.Coeff.
0.829
0.809
0.778
0.769
0.761
0.761
0.755
0.753
0.751
0.719







Procedures to view this superposition in your local computer by "UCSF Chimera".

    

  1.  Download the Reference molecule "3j79"(PDB-format) or 
 "3j79"(mmCIF-format), and read it.

  2.  Download the Target map "emd_1430.map.gz", and read it.

  3.  Copy following two command lines into a file 'transf.com'.

    turn -0.862904,-0.488217,-0.130543 24.781208 center 0,0,0 model #1
move 241.336256,235.863261,224.883953 model #1

    

  4.  Open 'transf.com' to execute it.

    
 * Don't move the map/molecule by your mouse until the step 4 have been finished !!




[Download the reference GMM(pdb 3j79)]

[Download the target GMM(emdb 1430)]

[Download gmfit result file(4131411)]